1981    A. A. Stuchebrukhov, Cooling of Internal Degrees of Freedom of Atoms and Molecules Using Resonance Radiation.
Kvant. Elecron. (Russian) 8:1906-1908 (1981); (English Translation: Soviet Journal of Quantum Electronics, 11: 1152-1154 (1981).

Re-discovered Schawlowís laser cooling when I was an undergraduate student.

1986    A. A. Stuchebrukhov, M. V. Kuzmin, V. N. Bagratashvili, V. S. Letokhov, Threshold Energy Dependence of Intramolecular
Vibrational Relaxation in Polyatomic Molecules. Chem. Phys. 107: 429-443 (1986).

Developed theory based on thermal Greenís functions and Dyson equation of the transition between regular and chaotic
vibrational motions (quasi-continuum threshold) in polyatomic molecules. Theory also gives a method for IR spectral lines,
and IVR rates of highly vibrationally excited polyatomic molecules.

1989     M. V. Kuzmin, A. A. Stuchebrukhov, Dynamical Chaos, Intramolecular Vibrational Relaxation and Spectroscopy of
Vibrationally Excited Polyatomic Molecules. Laser Spectroscopy of Vibrationally Excited Polyatomic Molecules,
edited by V.S. Letokhov (Adam Hilger, N.Y. Bristol, 1989) Chapter 4.

Our theory of chaos and IVR in polyatomic molecules.

1991     A. A. Stuchebrukhov, Green's Functions in Quantum Transition State Theory. J. Chem. Phys. 95: 4258-4276 (1991).

Developed Greenís function method for treatment of "anharmonicity" of the tunneling barrier for proton transfer reactions.

1993     A. A. Stuchebrukhov, R. A. Marcus, Theoretical Study of Intramolecular Vibrational Relaxation of Acetylenic CH Vibration
for v=1 and 2 in Large Polyatomic Molecules (CX3)3YCCH, where X=H or D and Y=C or Si.
J. Chem. Phys. 98: 6044-6061; J. Phys. Chem. 97: 12491-12499 (1993).

Theory of vibrational superexchange and dynamic tunneling.

1996     A. A. Stuchebrukhov, Tunneling Currents in Electron Transfer Reactions in Proteins. J. Chem. Phys. 104: 8424-8432 (1996).

Proposed the method of tunneling currents for the description of electron tunneling in molecules.

1998     A. A. Stuchebrukhov, Tunneling currents in long-distance electron transfer reactions. III, IV. Many-electron formulation.
J. Chem. Phys. 108: 8499 (1998).

Found a way to describe tunneling in many-electron systems from first principles.

1999     I. Daizadeh, J.-X. Guo, A. A. Stuchebrukhov. Vortex structure of the tunneling flow in long-range electron transfer reactions.
J. Chem. Phys. 110, 8865, 1999

Discovered vortices in tunneling flows, analogy with superfluid helium, relation to Bohmian dynamics.

1997     I. Daizadeh, E. S. Medvedev, A. A. Stuchebrukhov, Effect of Protein Dynamics on Biological Electron Transfer.
Proc. Natl. Acad. Sci. USA 94: 3703-9708 (1997).

Electron-phonon coupling and inelastic tunneling in proteins.

2000     Yuri Georgievskii, A. A. Stuchebrukhov, Concerted electron and proton transfer. Transition from non-adiabatic to adiabatic proton tunneling.
J. Chem. Phys. 113: 10438 (2000).

Theory of Landau-Zener transit for tunneling regime. Yuri has found analytical solution.

2001     A. A. Stuchebrukhov, Toward ab initio theory of long-distance electron tunneling in proteins: Tunneling current approach.
Advances in Chemical Physics 118: 1-44 (2001).

Summary of our theory of tunneling currents and related tunneling calculations of proteins and molecular wires.

2003     D. Popovic, A. A. Stuchebrukhov, Electrostatic study of proton pumping mechanism in cytochrome oxidase.
Submitted to JACS (2003)

Proposed a mechanism of redox-coupled proton pumping by cytochrome oxidase.